Effective Ways to Build and Evaluate Individual Survival Distributions
Humza Haider
and
Bret Hoehn
and
Sarah Davis
and
Russell Greiner
arXiv e-Print archive - 2018 via Local arXiv
Keywords:
cs.LG, stat.ML
First published: 2018/11/28 (6 years ago) Abstract: An accurate model of a patient's individual survival distribution can help
determine the appropriate treatment for terminal patients. Unfortunately, risk
scores (e.g., from Cox Proportional Hazard models) do not provide survival
probabilities, single-time probability models (e.g., the Gail model, predicting
5 year probability) only provide for a single time point, and standard
Kaplan-Meier survival curves provide only population averages for a large class
of patients meaning they are not specific to individual patients. This
motivates an alternative class of tools that can learn a model which provides
an individual survival distribution which gives survival probabilities across
all times - such as extensions to the Cox model, Accelerated Failure Time, an
extension to Random Survival Forests, and Multi-Task Logistic Regression. This
paper first motivates such "individual survival distribution" (ISD) models, and
explains how they differ from standard models. It then discusses ways to
evaluate such models - namely Concordance, 1-Calibration, Brier score, and
various versions of L1-loss - and then motivates and defines a novel approach
"D-Calibration", which determines whether a model's probability estimates are
meaningful. We also discuss how these measures differ, and use them to evaluate
several ISD prediction tools, over a range of survival datasets.